Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944841.1_cds_XP_016487547.1_78269
CDS Infomation

[gene=LOC107807634] [db_xref=GeneID:107807634] [protein=probable serine/threonine-protein kinase At1g09600 isoform X4] [protein_id=XP_016487547.1] [location=join(43556..43669,44476..44760,44885..45202,45353..45580,46904..47004,47312..47393,47894..48358,48988..49158)] [gbkey=CDS]
Sequence

ATGGAGGCGGAGTTGATTGCTGCCGGATGGCCTTCTTCGCTTGCTTCTGTGGCCGGTGAA
GCTATTAACGGATGGCTTCCACGCAAGGCTGATACTTTTGAGAAATTAGACAAGATTGGC
CAAGGAACTTATAGTAGCGTATACAAGGCACGTGACCTGGTTAATGATAAAGTTGTTGCG
CTCAAAAGAGTGAGGTTTGATAAAATGGATCCCGAAAGTATAAAATTTATGGCAAGGGAG
ATTGTTATTCTGCGGAGGCTTGATCATCCAAATATCATCAAATTGGAAGGTTTAGTTGTA
TCAAGAGCATCTTGTAGTCTGTACCTTGTCTTCGAGTACATGGAACACGATCTTACTGGA
TTGGCGTCTCTTCCCGGTATTAAATTTACAGAGCCGCAGGTTAAATGTTACATGCGACAG
CTTTTAAGTGGACTTGATCATTGCCATAATCGAGGTGTTCTGCATCGGGATATCAAGGGT
TCTAATCTTCTAATTGACAATAATGGCGCTTTAAAGATTGCAGATTTTGGGTTGGCGAAC
TTTTTCGATAACCAGCAAAGTGTTCCATTAACAAGCCGTGTTGTGACTCTTTGGTATCGA
CCGCCAGAGCTATTACTTGGAGCAAGTCATTATGGAGCTGCAGTAGACTTGTGGAGTACT
GGCTGTATACTTGGAGAATTATATGTCGCCAAGCCTATAATGCCCGGTAGGACAGAGGTG
GAGCAACTACATAAAATCTTTAAGCTTTGTGGTTCGCCAACTGCGGATTATTGGAAAAAA
ACAAAACTATCTTATTCAGCAGTATTTAAACCTGTACAGCCTTACAAACGGCGTATTGGG
GAAAGATTTAAGGAGCTTCCTCCATCTGCTGTCGGATTACTGGAGACACTACTTTCTATC
GATCCTTCACTTAGAGGAACAGCAGCTGGTGCTCTTGAGAGTGAGTTCTTCACCACAAAG
CCATTTGCTTGTGATCCTTTAACTTTGCCGACATATCCTCCCAGCAAGGAAATTGATGCA
AAATTGCGGGAAGAGGAAGCTAAAAGGCAACCCACTGCAAATGGATCAAAAGAACGTCAG
GCAGCTCCAGCAGATGATGCTAATGCCAAGTTGGCAAGGTCAATGCAGCAGGGGAAGCAG
ACCAGTTCCAATCCTAAGAGCCAAAGTGATCGGTTCAATCCCCAGAAGGTAGCTGCTTCT
GGCTTTCGAAATGATCCACCTAAAGCATCACAAGCAGTGAAAGAAACTGTCAACAATCAC
CTCGAGAATCTTTCAGAGAGATTTTCAGCCAACGAGGATCTCTCGGAGACATTTTCTCAT
TCAGTCCCTCTGGCTCTAGGGGTTGGGTGCGCAAAATCTGGGATGAAATATGATGATATT
TCTATTGGTCTGAATAGAGCCGACATATCGAACTTAGCAGCATCCAGGTCCGTTGTGTCT
GGAGATGCTCGAGATGCAGCCCATCAAGTAGAAAGGCGAGCGCGGTTGCTAGATGAACAT
TCGAGGAAGCAGGACGGGAAGTATCTCACGCAGAACTATACGGGTTCTCATCAATTTGAA
AGTGGAAGGACCAGTTTGAAGGAGGCAAATATGAACGGCCATGATTACGAGGGAAACAAG
ATCTATTTTTCTGGTTCACTACTAGTTCAATCAAGTAAAGTAGATCAAATGCTTAAAGAC
CATGATCGTCAGATCCAGGAAGCTGCACGACGAGCGAGGCTGGAGAAGGCAAGAGCAGGT
CAAGCTCAGGCTCGAGGAATGTGA

Peptide Sequence

PEP ID

XP_016487547.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g09600 isoform X4 [Nicotiana tabacum]
Sequence

MEAELIAAGWPSSLASVAGEAINGWLPRKADTFEKLDKIGQGTYSSVYKARDLVNDKVVA
LKRVRFDKMDPESIKFMAREIVILRRLDHPNIIKLEGLVVSRASCSLYLVFEYMEHDLTG
LASLPGIKFTEPQVKCYMRQLLSGLDHCHNRGVLHRDIKGSNLLIDNNGALKIADFGLAN
FFDNQQSVPLTSRVVTLWYRPPELLLGASHYGAAVDLWSTGCILGELYVAKPIMPGRTEV
EQLHKIFKLCGSPTADYWKKTKLSYSAVFKPVQPYKRRIGERFKELPPSAVGLLETLLSI
DPSLRGTAAGALESEFFTTKPFACDPLTLPTYPPSKEIDAKLREEEAKRQPTANGSKERQ
AAPADDANAKLARSMQQGKQTSSNPKSQSDRFNPQKVAASGFRNDPPKASQAVKETVNNH
LENLSERFSANEDLSETFSHSVPLALGVGCAKSGMKYDDISIGLNRADISNLAASRSVVS
GDARDAAHQVERRARLLDEHSRKQDGKYLTQNYTGSHQFESGRTSLKEANMNGHDYEGNK
IYFSGSLLVQSSKVDQMLKDHDRQIQEAARRARLEKARAGQAQARGM

Transcript Sequence

Gene sequence data has not been registered.